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Life Science Informatics

Publications

Taylor D.L., Houston S., 2011: A bioinformatics pipeline for sequence-based analyses of fungal biodiversity. Methods Mol Biol.; 722:141-55.

Houston S., 2011: Poster: Life Science Informatics, Bio-IT World Conference and Expo, 14-16 April, Boston, MA

Long, J., M. Roth, 2007: Synthetic Microarray Data Generation with RANGE and NEMO. Bioinformatics 2008 Jan 1;24(1):132-4. Epub 2007 Nov 3 (http://range.sourceforge.net)

Taylor, D. L., I. Herriott, J. Long, K. O'Neill, 2007: TOPO TA is A-OK: a test of phylogenetic bias in fungal environmental clone library construction, Environmental Microbiology 2007 May; 9(5):1329-1334

Houston, S., D. Cardin, J. Long, 2007: Poster: The Compute Portal Project, 11th Annual International Conference on Research in Computational Molecular Biology (RECOMB), 21-25 April, Oakland, CA

Long, J., T. G. Marr, S. Houston, 2007: Poster: A Simple GenBank Search Engine, 11th Annual International Conference on Research in Computational Molecular Biology (RECOMB), 21-25 April, Oakland, CA

Taylor, D. L., I. Herriott, J. Geml, T. G. Marr, J. Long, R. W. Ruess, H. C. Nusbaum, 2005: Fungal basidiome and soil diversity under the Aurora Borealis, Presented at the Joint Meeting of the Mycological Society of America and the Mycological Society of Japan, July 31-August 4, Hilo, HI.

Long, J., T. G. Marr, 2005: Poster: WFLOW: A Browser Based Web Services Workflow Editor, 13th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), 25-29 June, Detroit, MI (http://wflow.sourceforge.net)

Geml, J., J. Long, S. Houston, T. Marr, and D. L. Taylor 2005: Poster: Imrpoved bioinformatic tools for the identification of fungi based on ITS and LSU rDNA sequences, 23rd Fungal Genetics Conference, 15-19 March, Pacific Grove, CA

Long, J., 2004: Poster: The Portable Cray Bioinformatics Library, 8th Annual International Conference on Research in Computational Molecular Biology (RECOMB), 27-31 March, San Diego, CA

Long, J., 2003: The Portable Cray Bioinformatics Library, Proceedings, 45th Cray User’s Group Conference, 12-16 May, Columbus, OH (http://cbl.sourceforge.net)

Long, J., 2000: A Parallel Implementation of the Terrestrial Ecosystem Model (TEM), Master’s Thesis, Technical Report 00-01, Department of Mathematical Sciences, University of Alaska Fairbanks

Bower, G., O. Lawlor, J. Long, 1997 Lunch on the Run: Pursuit-Evasion Games in the Late Cretaceous, The UMAP Journal, Vol.18, No. 3, 255-276

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